HL_28LN_103
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAGGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28LN_103 not in the Motif Atlas
- Homologous match to HL_8GLP_071
- Geometric discrepancy: 0.091
- The information below is about HL_8GLP_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_12125.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
28LN|1|B5|U|4645
28LN|1|B5|G|4646
28LN|1|B5|A|4647
28LN|1|B5|G|4648
28LN|1|B5|G|4649
28LN|1|B5|A|4650
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BR
- 60S ribosomal protein L19
- Chain BU
- 60S ribosomal protein L22
- Chain Bd
- 60S ribosomal protein L31
- Chain Bv
- Transcription factor BTF3
Coloring options: