HL_28LN_112
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- G(PSU)GAAUU(OMG)CAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 28LN|1|B8|C|83, 28LN|1|B8|U|85, 28LN|1|B8|U|86
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B8|G|68
28LN|1|B8|PSU|69
28LN|1|B8|G|70
28LN|1|B8|A|71
28LN|1|B8|A|72
28LN|1|B8|U|73
28LN|1|B8|U|74
28LN|1|B8|OMG|75
28LN|1|B8|C|76
28LN|1|B8|A|77
28LN|1|B8|G|78
28LN|1|B8|G|79
28LN|1|B8|A|80
28LN|1|B8|C|81
28LN|1|B8|A|82
28LN|1|B8|C|83
28LN|1|B8|A|84
28LN|1|B8|U|85
28LN|1|B8|U|86
28LN|1|B8|G|87
28LN|1|B8|A|88
28LN|1|B8|U|89
28LN|1|B8|C|90
Current chains
- Chain B8
- 5.8S rRNA
Nearby chains
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- 60S ribosomal protein L26
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Large ribosomal subunit protein eL37
- Chain Bl
- 60S ribosomal protein L39
Coloring options: