HL_28UL_039

3D structure

PDB id

28UL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational ground state mutation in SSU-h41, with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UL|1|a|U|158
28UL|1|a|G|159
28UL|1|a|A|160
28UL|1|a|A|161
28UL|1|a|U|162
28UL|1|a|C|163
28UL|1|a|C|164
28UL|1|a|A|165
28UL|1|a|U|166
28UL|1|a|A|167
28UL|1|a|G|168

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

Large ribosomal subunit protein bL28