HL_28ZU_021

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|A|957
28ZU|1|S2|G|958
28ZU|1|S2|G|959
28ZU|1|S2|U|960
28ZU|1|S2|G|961
28ZU|1|S2|A|962
28ZU|1|S2|A|963
28ZU|1|S2|A|964
28ZU|1|S2|U|965
28ZU|1|S2|PSU|966

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain B

mRNA

Chain D

Eukaryotic translation initiation factor 2 subunit 1

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14