HL_28ZU_034

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUGCAAUUAU(PSU)

Length

12 nucleotides

Bulged bases

28ZU|1|S2|U|1621, 28ZU|1|S2|U|1622, 28ZU|1|S2|A|1623

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|A|1614
28ZU|1|S2|U|1615
28ZU|1|S2|U|1616
28ZU|1|S2|G|1617
28ZU|1|S2|C|1618
28ZU|1|S2|A|1619
28ZU|1|S2|A|1620
28ZU|1|S2|U|1621
28ZU|1|S2|U|1622
28ZU|1|S2|A|1623
28ZU|1|S2|U|1624
28ZU|1|S2|PSU|1625

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18

Chain ST

Small ribosomal subunit protein eS19

Chain Sd

40S ribosomal protein S29