HL_9H3G_106
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- AUUGCAAUUGU(PSU)
- Length
- 12 nucleotides
- Bulged bases
- 9H3G|1|h1|U|1559, 9H3G|1|h1|U|1560, 9H3G|1|h1|G|1561
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3G|1|h1|A|1552
9H3G|1|h1|U|1553
9H3G|1|h1|U|1554
9H3G|1|h1|G|1555
9H3G|1|h1|C|1556
9H3G|1|h1|A|1557
9H3G|1|h1|A|1558
9H3G|1|h1|U|1559
9H3G|1|h1|U|1560
9H3G|1|h1|G|1561
9H3G|1|h1|U|1562
9H3G|1|h1|PSU|1563
Current chains
- Chain h1
- Ribosomal RNA 18S
Nearby chains
- Chain BL
- Small ribosomal subunit protein eS19x
- Chain Ca
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Chain Wa
- Small ribosomal subunit protein uS13z/uS13y/uS13x
- Chain Ya
- Small ribosomal subunit protein uS19y
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