HL_28ZX_011
3D structure
- PDB id
- 28ZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with mRNA (Kozak_1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28ZX_011 not in the Motif Atlas
- Homologous match to HL_9PN5_085
- Geometric discrepancy: 0.1822
- The information below is about HL_9PN5_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 456
Unit IDs
28ZX|1|S2|U|416
28ZX|1|S2|C|417
28ZX|1|S2|A|418
28ZX|1|S2|G|419
28ZX|1|S2|G|420
28ZX|1|S2|G|421
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SJ
- 40S ribosomal protein S9
- Chain SL
- Small ribosomal subunit protein uS17
- Chain SW
- 40S ribosomal protein S15a
- Chain SX
- 40S ribosomal protein S23
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