HL_28ZX_024

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCCCAU

Length

8 nucleotides

Bulged bases

28ZX|1|S2|U|1114, 28ZX|1|S2|U|1115, 28ZX|1|S2|C|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|A|1113
28ZX|1|S2|U|1114
28ZX|1|S2|U|1115
28ZX|1|S2|C|1116
28ZX|1|S2|C|1117
28ZX|1|S2|C|1118
28ZX|1|S2|A|1119
28ZX|1|S2|U|1120

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S3a

Chain Sb

40S ribosomal protein S27

Chain a

Eukaryotic translation initiation factor 3 subunit A

Chain c

Eukaryotic translation initiation factor 3 subunit C

Chain d

Eukaryotic translation initiation factor 3 subunit D