HL_28ZY_010

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

28ZY|1|S2|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|G|377
28ZY|1|S2|U|378
28ZY|1|S2|C|379
28ZY|1|S2|G|380
28ZY|1|S2|C|381
28ZY|1|S2|C|382
28ZY|1|S2|G|383
28ZY|1|S2|U|384
28ZY|1|S2|G|385
28ZY|1|S2|C|386
28ZY|1|S2|C|387

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

Small ribosomal subunit protein uS17