HL_28ZY_021

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|A|957
28ZY|1|S2|G|958
28ZY|1|S2|G|959
28ZY|1|S2|U|960
28ZY|1|S2|G|961
28ZY|1|S2|A|962
28ZY|1|S2|A|963
28ZY|1|S2|A|964
28ZY|1|S2|U|965
28ZY|1|S2|PSU|966

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain B

mRNA

Chain D

Eukaryotic translation initiation factor 2 subunit 1

Chain SB

40S ribosomal protein S3a

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14