HL_2AAR_007

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AGAAUU

Length

6 nucleotides

Bulged bases

2AAR|1|0|U|206

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_007 not in the Motif Atlas

Homologous match to HL_7A0S_007

Geometric discrepancy: 0.2724

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

2AAR|1|0|A|202
2AAR|1|0|G|203
2AAR|1|0|A|204
2AAR|1|0|A|205
2AAR|1|0|U|206
2AAR|1|0|U|207

Current chains

Chain 0

23S ribosomal RNA

Nearby chains