RNA 3D Hub //

2AAR Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_2AAR_0011/0/58:67Pseudoknot with intercalation
homologous
HL_7A0S_001
HL_17803.2
HL_2AAR_0021/0/85:95No text annotation
homologous
HL_7A0S_002
HL_76590.1
HL_2AAR_0031/0/121:126No text annotation
homologous
HL_4WF9_003
HL_75660.9
HL_2AAR_0041/0/133:138No text annotation
geometric
HL_4WF9_003
HL_75660.9
HL_2AAR_0051/0/146:151UNCG variation
geometric
HL_1P6V_001
NA
HL_2AAR_0061/0/171:178No text annotation
geometric
HL_5J7L_139
NA
HL_2AAR_0071/0/202:207No text annotation
homologous
HL_7A0S_007
HL_91813.1
HL_2AAR_0081/0/223:229No text annotation
homologous
HL_7RQB_008
NA
HL_2AAR_0091/0/316:323T-loop with 2 stacked bulged bases
homologous
HL_4WF9_010
HL_13999.4
HL_2AAR_0101/0/330:334No text annotation
homologous
HL_5J7L_143
NA
HL_2AAR_0111/0/338:346T-loop with unstacked turn
homologous
HL_5J7L_144
NA
HL_2AAR_0121/0/395:405No text annotation
homologous
HL_7A0S_013
HL_91503.8
HL_2AAR_0131/0/423:430Pseudoknot geometry
homologous
HL_7A0S_014
HL_30680.5
HL_2AAR_0141/0/473:478GNRA
homologous
HL_7RQB_015
NA
HL_2AAR_0151/0/498:503GNRA
homologous
HL_7A0S_016
HL_34789.5
HL_2AAR_0161/0/552:560No text annotation
homologous
HL_7RQB_017
NA
HL_2AAR_0171/0/575:584T-loop with 2 stacked bulged bases
geometric
HL_7A0S_018
HL_33597.4
HL_2AAR_0681/0/615:633No text annotation
HL_2AAR_0181/0/621:628No text annotation
HL_2AAR_0191/0/640:645GNRA
homologous
HL_7A0S_020
HL_34789.5
HL_2AAR_0201/0/651:658No text annotation
homologous
HL_7A0S_021
HL_81314.1
HL_2AAR_0701/0/758:765No text annotation
HL_2AAR_0231/0/792:798No text annotation
geometric
HL_7A0S_007
HL_91813.1
HL_2AAR_0241/0/839:844No text annotation
geometric
HL_7A0S_024
HL_27530.2
HL_2AAR_0261/0/966:973GNRA
homologous
HL_7A0S_026
HL_34789.5
HL_2AAR_0271/0/989:996No text annotation
homologous
HL_7A0S_027
HL_47171.2
HL_2AAR_0311/0/1235:1240GNRA
homologous
HL_7A0S_031
HL_34789.5
HL_2AAR_0321/0/1294:1302No text annotation
homologous
HL_7RQB_033
NA
HL_2AAR_0331/0/1337:1343Pseudoknot geometry with 3' bulge
homologous
HL_4WF9_033
HL_49081.1
HL_2AAR_0341/0/1376:1381GNRA variation
homologous
HL_7A0S_034
HL_34789.5
HL_2AAR_0351/0/1402:1411No text annotation
geometric
HL_2ZNI_001
HL_75660.9
HL_2AAR_0361/0/1466:1476Pseudoknot
homologous
HL_7A0S_036
HL_00824.1
HL_2AAR_0371/0/1508:1514Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_170
NA
HL_2AAR_0391/0/1581:1584Mini UNCG
homologous
HL_5J7L_172
NA
HL_2AAR_0401/0/1628:1635No text annotation
homologous
HL_7A0S_040
HL_28592.3
HL_2AAR_0411/0/1647:1652No text annotation
homologous
HL_7RQB_041
NA
HL_2AAR_0421/0/1708:1713UNCG
homologous
HL_7A0S_042
HL_61337.5
HL_2AAR_0431/0/1731:1735No text annotation
homologous
HL_7A0S_043
NA
HL_2AAR_0441/0/1767:1779No text annotation
homologous
HL_7A0S_045
HL_50951.2
HL_2AAR_0451/0/1797:1803GNRA
homologous
HL_7A0S_046
HL_93535.3
HL_2AAR_0461/0/1856:1861GNRA
homologous
HL_7A0S_047
HL_34789.5
HL_2AAR_0471/0/1893:1903No text annotation
HL_2AAR_0481/0/1932:1940No text annotation
homologous
HL_7RQB_049
NA
HL_2AAR_0491/0/2010:2019No text annotation
homologous
HL_7RQB_050
NA
HL_2AAR_0501/0/2188:2197No text annotation
HL_2AAR_0511/0/2227:2235LSU P loop
homologous
HL_7A0S_052
HL_11974.3
HL_2AAR_0521/0/2243:2255No text annotation
homologous
HL_7A0S_053
HL_02042.2
HL_2AAR_0531/0/2282:2292No text annotation
geometric
HL_8KAH_003
NA
HL_2AAR_0541/0/2303:2310Pseudoknot geometry
homologous
HL_7A0S_055
HL_52651.3
HL_2AAR_0551/0/2334:2341GNRA with extra cWW
homologous
HL_7A0S_056
HL_87268.3
HL_2AAR_0561/0/2353:2358GNRA
homologous
HL_4WF9_054
HL_34789.5
HL_2AAR_0571/0/2383:2392No text annotation
homologous
HL_7A0S_058
HL_51853.2
HL_2AAR_0581/0/2450:2458No text annotation
homologous
HL_5J7L_193
NA
HL_2AAR_0591/0/2507:2514GNRA variation
homologous
HL_7A0S_060
HL_46665.3
HL_2AAR_0601/0/2530:2536LSU A loop
homologous
HL_7A0S_061
HL_48677.2
HL_2AAR_0611/0/2573:2578GNRA
homologous
HL_7A0S_062
HL_34789.5
HL_2AAR_0621/0/2637:2642GNRA
homologous
HL_7A0S_063
HL_34789.5
HL_2AAR_0711/0/2680:2685Ribsomal LSU H95
homologous
HL_7A0S_064
HL_12125.3
HL_2AAR_0641/0/2725:2739No text annotation
homologous
HL_7A0S_065
HL_53269.3
HL_2AAR_0661/0/2794:2802No text annotation
homologous
HL_7A0S_067
HL_37889.2
HL_2AAR_0671/0/2831:2836GNRA
homologous
HL_7A0S_068
HL_34789.5

Problematic loops

#loop idProblemSequence
HL_2AAR_021No text annotation
HL_2AAR_022No text annotation
HL_2AAR_025No text annotation
HL_2AAR_028No text annotation
HL_2AAR_029No text annotation
HL_2AAR_030No text annotation
HL_2AAR_038No text annotation
HL_2AAR_069No text annotation
HL_2AAR_063No text annotation
HL_2AAR_065No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_2AAR_0011/0/24:30,
1/0/520:526		Triple sheared with non-canonical cWW
homologous
IL_7A0S_001
IL_22311.2
IL_2AAR_0021/0/36:37,
1/0/454:456		Single bulged A
homologous
IL_7A0S_002
IL_14190.3
IL_2AAR_0041/0/42:43,
1/0/447:449		Minor groove platform
homologous
IL_5J7L_247
NA
IL_2AAR_0051/0/80:84,
1/0/96:103		Kink-turn
homologous
IL_7A0S_004
IL_94910.1
IL_2AAR_0071/0/160:161,
1/0/189:191		Single stack bend
homologous
IL_5J7L_249
NA
IL_2AAR_0081/0/165:171,
1/0/178:185		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_006
IL_62167.4
IL_2AAR_0091/0/215:222,
1/0/230:236		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_007
IL_62167.4
IL_2AAR_1201/0/299:302,
1/0/360:363		No text annotation
IL_2AAR_0111/0/303:306,
1/0/354:359		No text annotation
homologous
IL_7A0S_008
IL_05192.8
IL_2AAR_0131/0/492:495,
1/0/506:519		No text annotation
homologous
IL_7A0S_009
IL_44923.2
IL_2AAR_0141/0/573:575,
1/0/584:586		Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_71625.4
IL_2AAR_0151/0/600:602,
1/0/678:679		Single bulged A
homologous
IL_7A0S_012
IL_14190.3
IL_2AAR_0161/0/615:621,
1/0/628:633		No text annotation
IL_2AAR_0171/0/685:687,
1/0/819:821		Isolated non-canonical cWW pair
geometric
IL_7A0S_014
IL_01003.5
IL_2AAR_0181/0/687:691,
1/0/812:819		tHW-tHW cross-strand stack
homologous
IL_7A0S_015
IL_73855.2
IL_2AAR_0191/0/715:716,
1/0/741:743		Single bulged G
homologous
IL_7A0S_017
IL_28408.3
IL_2AAR_0201/0/716:721,
1/0/736:741		Triple sheared with non-canonical cWW
geometric
IL_7A0S_018
IL_29495.2
IL_2AAR_0211/0/751:754,
1/0/769:771		Major groove platform with extra cWW
geometric
IL_7RQB_022
NA
IL_2AAR_0221/0/754:756,
1/0/767:769		Isolated non-canonical cWW pair
homologous
IL_7A0S_020
IL_01003.5
IL_2AAR_0241/0/850:851,
1/0/951:953		Single stack bend
homologous
IL_7A0S_022
IL_15011.4
IL_2AAR_1211/0/857:861,
1/0/942:945		No text annotation
homologous
IL_4WF9_029
IL_01742.1
IL_2AAR_0261/0/863:864,
1/0/938:940		Single stack bend
geometric
IL_5J7L_249
NA
IL_2AAR_0271/0/864:866,
1/0/936:938		Isolated non-canonical cWW pair
homologous
IL_7A0S_026
IL_01003.5
IL_2AAR_1221/0/870:875,
1/0/927:932		No text annotation
IL_2AAR_0291/0/875:877,
1/0/924:927		Major groove platform with extra cWW
geometric
IL_3PDR_004
IL_36931.3
IL_2AAR_0301/0/877:881,
1/0/921:924		C-loop
geometric
IL_5J7L_347
NA
IL_2AAR_0311/0/883:885,
1/0/917:919		Isolated non-canonical cWW pair
homologous
IL_7A0S_030
IL_42997.6
IL_2AAR_0321/0/963:965,
1/0/974:976		Isolated non-canonical cWW pair
homologous
IL_7A0S_031
IL_01003.5
IL_2AAR_0331/0/1005:1007,
1/0/1170:1171		Single bulged C
homologous
IL_7A0S_032
IL_05642.4
IL_2AAR_0341/0/1009:1013,
1/0/1164:1168		UAA/GAN
homologous
IL_7A0S_033
IL_08938.2
IL_2AAR_0351/0/1015:1022,
1/0/1161:1162		SSU/LSU pseudoknot
homologous
IL_7A0S_034
IL_46868.1
IL_2AAR_0361/0/1022:1024,
1/0/1160:1161		Single bulged U
geometric
IL_5TBW_050
NA
IL_2AAR_0371/0/1029:1035,
1/0/1150:1155		Kink-turn related
homologous
IL_7A0S_036
IL_57188.6
IL_2AAR_1131/0/1035:1041,
1/0/1135:1150		No text annotation
geometric
IL_7A0S_037
IL_50715.4
IL_2AAR_0381/0/1042:1045,
1/0/1132:1134		Isolated non-canonical cWW pair
homologous
IL_5J7L_282
NA
IL_2AAR_0401/0/1051:1062,
1/0/1120:1126		No text annotation
IL_2AAR_0441/0/1210:1213,
1/0/1259:1263		Tandem non-canonical cWW pairs
geometric
IL_4EYA_008
IL_37443.1
IL_2AAR_0451/0/1218:1220,
1/0/1252:1254		Isolated non-canonical cWW pair
homologous
IL_7A0S_042
IL_01003.5
IL_2AAR_0461/0/1221:1228,
1/0/1247:1251		Kink-turn
homologous
IL_7A0S_043
IL_90775.2
IL_2AAR_0471/0/1232:1234,
1/0/1241:1243		Intercalated cWW
homologous
IL_7A0S_044
IL_53541.1
IL_2AAR_0481/0/1275:1282,
1/0/1994:2000		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_049
NA
IL_2AAR_0491/0/1332:1336,
1/0/1344:1346		C-loop
homologous
IL_7A0S_047
IL_06671.2
IL_2AAR_0501/0/1364:1368,
1/0/1389:1393		UAA/GAN
homologous
IL_7A0S_048
IL_89021.4
IL_2AAR_0511/0/1370:1374,
1/0/1383:1387		tSH-tWH-tHS
homologous
IL_7A0S_049
IL_05821.2
IL_2AAR_0521/0/1426:1430,
1/0/1598:1605		Kink-turn
homologous
IL_7A0S_050
IL_28245.1
IL_2AAR_0531/0/1431:1436,
1/0/1593:1597		No text annotation
IL_2AAR_1181/0/1431:1437,
1/0/1591:1597		No text annotation
geometric
IL_5TBW_088
NA
IL_2AAR_0541/0/1436:1437,
1/0/1591:1593		No text annotation
IL_2AAR_0551/0/1447:1449,
1/0/1573:1576		Isolated non-canonical cWW pair
homologous
IL_7A0S_052
IL_38565.3
IL_2AAR_0561/0/1451:1454,
1/0/1567:1571		tSH-tHW
homologous
IL_7A0S_053
IL_74317.1
IL_2AAR_0571/0/1463:1465,
1/0/1477:1478		Single stack bend
homologous
IL_7A0S_054
IL_15011.4
IL_2AAR_0581/0/1483:1490,
1/0/1533:1539		No text annotation
IL_2AAR_0591/0/1490:1494,
1/0/1529:1533		Double sheared with non-canonical cWW
geometric
IL_5J7L_274
NA
IL_2AAR_0601/0/1495:1499,
1/0/1521:1528		No text annotation
IL_2AAR_0631/0/1668:1673,
1/0/1987:1989		No text annotation
homologous
IL_7A0S_059
IL_12566.5
IL_2AAR_0641/0/1680:1682,
1/0/1978:1980		Isolated tWW turn
homologous
IL_5J7L_305
NA
IL_2AAR_0651/0/1683:1686,
1/0/1976:1977		Major groove platform; stack outside cWW
geometric
IL_5J7L_306
NA
IL_2AAR_1191/0/1683:1691,
1/0/1973:1977		No text annotation
homologous
IL_7A0S_109
IL_80252.2
IL_2AAR_0661/0/1686:1691,
1/0/1973:1976		Intercalated tWH
homologous
IL_7RQB_067
NA
IL_2AAR_0671/0/1703:1708,
1/0/1713:1719		tSH-tSH-tHH-tHS
geometric
IL_7A0S_063
IL_20700.2
IL_2AAR_0681/0/1761:1762,
1/0/1963:1965		Single bulged A
homologous
IL_7A0S_064
IL_14190.3
IL_2AAR_0691/0/1789:1795,
1/0/1805:1813		Kink-turn related
homologous
IL_5J7L_313
NA
IL_2AAR_0701/0/1829:1832,
1/0/1885:1886		Minor groove platform, major groove intercalation
homologous
IL_7A0S_066
IL_55206.2
IL_2AAR_0711/0/1833:1834,
1/0/1881:1884		Major groove intercalation
homologous
IL_7A0S_067
IL_77710.2
IL_2AAR_0721/0/1838:1841,
1/0/1876:1877		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_316
NA
IL_2AAR_0731/0/1843:1847,
1/0/1870:1874		UAA/GAN with extra stack
homologous
IL_7RQB_074
NA
IL_2AAR_0741/0/1848:1852,
1/0/1865:1869		Triple sheared
homologous
IL_7A0S_070
IL_15190.3
IL_2AAR_0761/0/1916:1917,
1/0/1947:1950		Bulged stacked bases
homologous
IL_5J7L_318
NA
IL_2AAR_0771/0/1917:1928,
1/0/1944:1947		No text annotation
geometric
IL_7A0S_072
IL_04332.3
IL_2AAR_0781/0/2033:2035,
1/0/2596:2597		Major groove platform
homologous
IL_7RQB_078
NA
IL_2AAR_0791/0/2037:2040,
1/0/2590:2594		No text annotation
homologous
IL_7A0S_074
IL_70335.1
IL_2AAR_0801/0/2050:2052,
1/0/2421:2422		Single bulged U
homologous
IL_7RQB_080
NA
IL_2AAR_0811/0/2053:2054,
1/0/2417:2420		Minor groove platform
homologous
IL_7A0S_076
IL_34520.4
IL_2AAR_0821/0/2064:2066,
1/0/2215:2218		Isolated tHS basepair with bulges
homologous
IL_4WF9_082
IL_87316.3
IL_2AAR_0831/0/2068:2070,
1/0/2211:2213		Isolated non-canonical cWW pair
homologous
IL_7A0S_078
IL_71625.4
IL_2AAR_0901/0/2276:2278,
1/0/2296:2300		Isolated tHS basepair with bulges
geometric
IL_7RQB_082
NA
IL_2AAR_0911/0/2329:2332,
1/0/2343:2346		Double sheared
homologous
IL_7A0S_081
IL_58355.3
IL_2AAR_1231/0/2380:2382,
1/0/2393:2394		Major groove platform
homologous
IL_7A0S_082
IL_48076.9
IL_2AAR_0931/0/2432:2433,
1/0/2477:2479		Single stack bend
geometric
IL_4WF9_089
IL_15011.4
IL_2AAR_0941/0/2433:2434,
1/0/2475:2477		Major groove platform
homologous
IL_7RQB_092
NA
IL_2AAR_0951/0/2436:2438,
1/0/2472:2473		Major groove platform
geometric
IL_7A0S_085
IL_48076.9
IL_2AAR_0961/0/2438:2440,
1/0/2468:2472		Major groove minor groove platform with extra cWW
homologous
IL_7A0S_086
IL_36931.3
IL_2AAR_0971/0/2445:2449,
1/0/2459:2463		Triple sheared
homologous
IL_7RQB_095
NA
IL_2AAR_0981/0/2486:2487,
1/0/2559:2561		No text annotation
homologous
IL_9DFE_096
IL_46637.3
IL_2AAR_1001/0/2489:2491,
1/0/2553:2557		Isolated non-canonical cWW with bulges
geometric
IL_5J7L_340
NA
IL_2AAR_1011/0/2491:2492,
1/0/2550:2553		Multiple bulged bases
homologous
IL_7RQB_098
NA
IL_2AAR_1021/0/2501:2502,
1/0/2519:2522		Major groove platform with intercalation
homologous
IL_7A0S_091
IL_94991.2
IL_2AAR_1031/0/2570:2571,
1/0/2580:2582		Single bulged A
homologous
IL_7RQB_101
NA
IL_2AAR_1041/0/2615:2619,
1/0/2754:2762		tSH-tHS-tHW
homologous
IL_7A0S_093
IL_04638.4
IL_2AAR_1051/0/2631:2637,
1/0/2642:2647		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7A0S_094
IL_16458.6
IL_2AAR_1061/0/2659:2663,
1/0/2705:2707		C-loop
homologous
IL_5J7L_347
NA
IL_2AAR_1071/0/2665:2670,
1/0/2698:2703		No text annotation
IL_2AAR_1081/0/2674:2675,
1/0/2690:2694		Multiple bulged bases
homologous
IL_7A0S_097
IL_44609.3
IL_2AAR_1091/0/2717:2722,
1/0/2742:2747		UAA/GAN with extra cWW
homologous
IL_7A0S_098
IL_91079.1
IL_2AAR_1101/0/2813:2814,
1/0/2853:2855		Major groove intercalation
homologous
IL_7A0S_099
IL_28408.3
IL_2AAR_1111/0/2818:2820,
1/0/2846:2849		Decoding loop related
homologous
IL_7A0S_100
IL_05502.1
IL_2AAR_1121/0/2822:2827,
1/0/2840:2844		No text annotation
homologous
IL_7A0S_101
IL_48489.2

Problematic loops

#loop idProblemSequence
IL_2AAR_003Isolated non-canonical cWW pair
IL_2AAR_006Isolated non-canonical cWW pair
IL_2AAR_1149x8 Sarcin-Ricin; G-bulge
IL_2AAR_010No text annotation
IL_2AAR_012Isolated non-canonical cWW pair
IL_2AAR_023Isolated non-canonical cWW pair
IL_2AAR_025No text annotation
IL_2AAR_0287x7 Sarcin-Ricin with intercalated A; G-bulge
IL_2AAR_115Isolated non-canonical cWW pair
IL_2AAR_116UAA/GAN with extra cWW
IL_2AAR_039Isolated non-canonical cWW pair
IL_2AAR_041Single stack bend
IL_2AAR_042No text annotation
IL_2AAR_117No text annotation
IL_2AAR_043No text annotation
IL_2AAR_061Isolated cWH basepair
IL_2AAR_062No text annotation
IL_2AAR_075Isolated cWH basepair
IL_2AAR_084No text annotation
IL_2AAR_085Isolated cWH basepair
IL_2AAR_086No text annotation
IL_2AAR_087No text annotation
IL_2AAR_088No text annotation
IL_2AAR_089Isolated non-canonical cWW pair
IL_2AAR_092Isolated non-canonical cWW pair
IL_2AAR_099Isolated non-canonical cWW pair

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_2AAR_0091/0/30:31,
1/0/485:492,
1/0/519:520		No text annotation
homologous
J3_7A0S_001
J3_68715.2
J3_2AAR_0121/0/30:31,
1/0/485:495,
1/0/506:520		No text annotation
homologous
J3_4WF9_011
J3_17917.2
J3_2AAR_0131/0/32:35,
1/0/457:472,
1/0/479:484		No text annotation
homologous
J3_7A0S_016
J3_07616.2
J3_2AAR_0101/0/55:56,
1/0/69:75,
1/0/108:112		No text annotation
homologous
J3_5J7L_037
NA
J3_2AAR_0011/0/695:702,
1/0/786:790,
1/0/800:808		No text annotation
J3_2AAR_0021/0/710:713,
1/0/745:749,
1/0/773:778		No text annotation
geometric
J3_5TBW_005
NA
J3_2AAR_0041/0/1311:1316,
1/0/1641:1643,
1/0/1656:1659		No text annotation
homologous
J3_7A0S_006
J3_32852.7
J3_2AAR_0051/0/1319:1322,
1/0/1621:1627,
1/0/1636:1638		No text annotation
homologous
J3_5J7L_042
NA
J3_2AAR_0141/0/1357:1363,
1/0/1394:1398,
1/0/1415:1416		No text annotation
homologous
J3_7A0S_018
J3_94309.2
J3_2AAR_0151/0/1438:1443,
1/0/1580:1581,
1/0/1584:1590		No text annotation
homologous
J3_7A0S_019
J3_34864.3
J3_2AAR_0161/0/2074:2076,
1/0/2179:2183,
1/0/2202:2207		No text annotation
homologous
J3_7A0S_009
J3_17460.1
J3_2AAR_0171/0/2261:2263,
1/0/2363:2374,
1/0/2400:2406		No text annotation
homologous
J3_9DFE_015
J3_04772.2
J3_2AAR_0071/0/2274:2276,
1/0/2300:2302,
1/0/2311:2316		No text annotation
homologous
J3_7RQB_011
NA
J3_2AAR_0081/0/2496:2499,
1/0/2524:2526,
1/0/2540:2546		No text annotation
homologous
J3_7RQB_012
NA
J3_2AAR_0111/0/2789:2790,
1/0/2806:2811,
1/0/2857:2861		No text annotation
homologous
J3_7A0S_013
J3_76911.2
J4_2AAR_0011/0/308:312,
1/0/327:330,
1/0/334:336,
1/0/348:352		No text annotation
homologous
J4_7A0S_002
J4_16174.1
J4_2AAR_0021/0/611:615,
1/0/633:639,
1/0/646:650,
1/0/659:669		No text annotation
J4_2AAR_0031/0/1283:1289,
1/0/1307:1308,
1/0/1662:1665,
1/0/1992:1993		No text annotation
homologous
J4_7A0S_004
J4_64571.6
J4_2AAR_0041/0/1323:1327,
1/0/1351:1356,
1/0/1417:1418,
1/0/1613:1620		No text annotation
homologous
J4_7A0S_005
J4_77353.2
J4_2AAR_0051/0/1458:1460,
1/0/1481:1490,
1/0/1533:1547,
1/0/1556:1563		No text annotation
J4_2AAR_0061/0/1691:1699,
1/0/1723:1724,
1/0/1742:1755,
1/0/1971:1973		No text annotation
J4_2AAR_0071/0/1763:1767,
1/0/1779:1783,
1/0/1819:1822,
1/0/1958:1962		No text annotation
homologous
J4_5J7L_025
NA
J4_2AAR_0081/0/1825:1827,
1/0/1888:1889,
1/0/1907:1916,
1/0/1950:1955		No text annotation
homologous
J4_5J7L_026
NA
J4_2AAR_0111/0/2264:2268,
1/0/2322:2326,
1/0/2349:2351,
1/0/2360:2362		No text annotation
homologous
J4_7A0S_009
J4_98139.1
J4_2AAR_0101/0/2622:2625,
1/0/2653:2655,
1/0/2711:2716,
1/0/2748:2751		No text annotation
homologous
J4_7A0S_010
J4_54165.1
J5_2AAR_0011/0/46:53,
1/0/114:119,
1/0/128:129,
1/0/142:143,
1/0/154:155		No text annotation
homologous
J5_7A0S_001
J5_75459.1
J5_2AAR_0051/0/593:598,
1/0/681:684,
1/0/822:825,
1/0/1209:1210,
1/0/1263:1269		No text annotation
homologous
J5_7A0S_004
J5_74302.6
J5_2AAR_0061/0/2040:2047,
1/0/2425:2432,
1/0/2479:2487,
1/0/2559:2567,
1/0/2585:2590		No text annotation
J5_2AAR_0041/0/2057:2060,
1/0/2222:2225,
1/0/2237:2238,
1/0/2260:2261,
1/0/2406:2414		No text annotation
homologous
J5_7A0S_007
J5_39529.2
J6_2AAR_0011/0/44:45,
1/0/156:160,
1/0/191:201,
1/0/208:212,
1/0/239:243,
1/0/439:446		No text annotation
J6_2AAR_0021/0/2057:2060,
1/0/2222:2225,
1/0/2237:2238,
1/0/2260:2263,
1/0/2363:2374,
1/0/2400:2414		No text annotation
J7_2AAR_0011/0/829:835,
1/0/848:849,
1/0/954:957,
1/0/982:987,
1/0/998:1002,
1/0/1174:1180,
1/0/1194:1205		No text annotation
J11_2AAR_0011/0/8:15,
1/0/535:543,
1/0/569:573,
1/0/586:588,
1/0/1274:1275,
1/0/2000:2006,
1/0/2023:2026,
1/0/2604:2609,
1/0/2768:2771,
1/0/2781:2786,
1/0/2864:2869		No text annotation

Problematic loops

#loop idProblemSequence
J3_2AAR_003No text annotation
J3_2AAR_006No text annotation
J3_2AAR_018No text annotation
J4_2AAR_009No text annotation
J5_2AAR_002No text annotation
J5_2AAR_003No text annotation

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