HL_2AAR_058

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_058 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.1744

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

2AAR|1|0|A|2450
2AAR|1|0|G|2451
2AAR|1|0|U|2452
2AAR|1|0|C|2453
2AAR|1|0|C|2454
2AAR|1|0|A|2455
2AAR|1|0|U|2456
2AAR|1|0|A|2457
2AAR|1|0|U|2458

Current chains

Chain 0

23S ribosomal RNA

Nearby chains