HL_2AAR_066

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

2AAR|1|0|A|2795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_066 not in the Motif Atlas

Homologous match to HL_7A0S_067

Geometric discrepancy: 0.132

The information below is about HL_7A0S_067

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.2

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

13

Unit IDs

2AAR|1|0|G|2794
2AAR|1|0|A|2795
2AAR|1|0|A|2796
2AAR|1|0|G|2797
2AAR|1|0|A|2798
2AAR|1|0|C|2799
2AAR|1|0|C|2800
2AAR|1|0|A|2801
2AAR|1|0|C|2802

Current chains

Chain 0

23S ribosomal RNA

Nearby chains