HL_2B3J_004
3D structure
- PDB id
- 2B3J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Staphylococcus aureus tRNA Adenosine Deaminase, TadA, in Complex with RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2 Å
Loop
- Sequence
- ACU(P5P)CGGAU
- Length
- 9 nucleotides
- Bulged bases
- 2B3J|1|H|U|33, 2B3J|1|H|C|35, 2B3J|1|H|G|37
- QA status
- Modified nucleotides: P5P
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2B3J_004 not in the Motif Atlas
- Geometric match to HL_4V9F_019
- Geometric discrepancy: 0.3102
- The information below is about HL_4V9F_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42293.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
2B3J|1|H|A|31
2B3J|1|H|C|32
2B3J|1|H|U|33
2B3J|1|H|P5P|34
2B3J|1|H|C|35
2B3J|1|H|G|36
2B3J|1|H|G|37
2B3J|1|H|A|38
2B3J|1|H|U|39
Current chains
- Chain H
- anticodon stem-loop of t-RNA-Arg2 (nucleotides 27-42)
Nearby chains
- Chain C
- tRNA adenosine deaminase
- Chain D
- tRNA adenosine deaminase
- Chain F
- anticodon stem-loop of t-RNA-Arg2 (nucleotides 27-42)
Coloring options: