HL_2BH2_002

3D structure

PDB id

2BH2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of E. coli 5-methyluridine methyltransferase RumA in complex with ribosomal RNA substrate and S-adenosylhomocysteine.

Experimental method

X-RAY DIFFRACTION

Resolution

2.15 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

2BH2|1|D|A|1953, 2BH2|1|D|U|1956

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

2BH2|1|D|G|1949
2BH2|1|D|G|1950
2BH2|1|D|U|1951
2BH2|1|D|A|1952
2BH2|1|D|A|1953
2BH2|1|D|G|1954
2BH2|1|D|U|1955
2BH2|1|D|U|1956
2BH2|1|D|C|1957

Current chains

Chain D

23S RIBOSOMAL RNA 1932-1968

Nearby chains

Chain B

23S RRNA (URACIL-5-)-METHYLTRANSFERASE RUMA