HL_2CV0_005

3D structure

PDB id

2CV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu) and L-glutamate

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CCUCUCAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2CV0_005 not in the Motif Atlas

Geometric match to HL_1N78_002

Geometric discrepancy: 0.0697

The information below is about HL_1N78_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_81376.3

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

43

Unit IDs

2CV0|1|D|C|531
2CV0|1|D|C|532
2CV0|1|D|U|533
2CV0|1|D|C|534
2CV0|1|D|U|535
2CV0|1|D|C|536
2CV0|1|D|A|537
2CV0|1|D|A|538
2CV0|1|D|G|539

Current chains

Chain D

tRNA

Nearby chains

Chain B

glutamyl-tRNA synthetase