HL_2DER_005
3D structure
- PDB id
- 2DER (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUUUCACG
- Length
- 9 nucleotides
- Bulged bases
- 2DER|1|D|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.4
- Basepair signature
- cWW-cSW-F-F-F-cWW
- Number of instances in this motif group
- 9
Unit IDs
2DER|1|D|C|31
2DER|1|D|C|32
2DER|1|D|U|33
2DER|1|D|U|34
2DER|1|D|U|35
2DER|1|D|C|36
2DER|1|D|A|37
2DER|1|D|C|38
2DER|1|D|G|39
Current chains
- Chain D
- tRNA
Nearby chains
- Chain B
- tRNA-specific 2-thiouridylase mnmA
Coloring options: