HL_2DU3_002

3D structure

PDB id

2DU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase complexed with tRNACys and O-phosphoserine

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

ACUGCAGAU

Length

9 nucleotides

Bulged bases (A, C, G, U)

932U, 933G, 934C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50537.4

Basepair signature

cWW-cWW-F-F

Number of instances in this motif group

3

Unit IDs

2DU3|1|D|A|930
2DU3|1|D|C|931
2DU3|1|D|U|932
2DU3|1|D|G|933
2DU3|1|D|C|934
2DU3|1|D|A|935
2DU3|1|D|G|936
2DU3|1|D|A|937
2DU3|1|D|U|938

Current chains

Chain D

tRNA

Nearby chains

Chain A

O-phosphoseryl-tRNA synthetase