2DU3 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2DU3_001 | 1/D/912:922 | No text annotation HL_34964.1 | ||
| HL_2DU3_002 | 1/D/930:938 | No text annotation HL_38808.1 | ||
| HL_2DU3_003 | 1/D/952:960 | T-loop with 2 stacked bulged bases HL_28252.8 | ||
| HL_2DU3_004 | 1/D/912:922 | No text annotation | geometric HL_2DU3_001 HL_34964.1 | |
| HL_2DU3_005 | 1/D/930:938 | No text annotation | geometric HL_2DU3_002 HL_38808.1 | |
| HL_2DU3_006 | 1/D/952:960 | T-loop with 2 stacked bulged bases |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2DU3_003 | 1/D/907:910, 1/D/924:927, 1/D/941:948, 1/D/964:965 | tRNA junction J4_65285.1 | ||
| J4_2DU3_004 | 1/D/907:910, 1/D/924:927, 1/D/941:948, 1/D/964:965 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_2DU3_001 | No text annotation | ||
| J4_2DU3_002 | No text annotation |
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