HL_2ES5_004

3D structure

PDB id

2ES5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SRE RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CUGG

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2ES5_004 not in the Motif Atlas

Geometric match to HL_1ZBH_001

Geometric discrepancy: 0.3434

The information below is about HL_1ZBH_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

2ES5|4|A|C|10
2ES5|4|A|U|11
2ES5|4|A|G|12
2ES5|4|A|G|13

Current chains

Chain A

5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3'

Nearby chains