HL_2F4V_023

3D structure

PDB id

2F4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosome + designer antibiotic

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

2F4V|1|A|C|1030|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2F4V_023 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.354

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

2F4V|1|A|C|1030
2F4V|1|A|G|1030|||A
2F4V|1|A|C|1030|||B
2F4V|1|A|G|1030|||C
2F4V|1|A|A|1030|||D
2F4V|1|A|G|1031

Current chains

Chain A

16S ribosomal RNA

Nearby chains