HL_2I7Z_009

3D structure

PDB id

2I7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

GAAA tetraloop receptor complex with associated manganese ions.

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2I7Z_009 not in the Motif Atlas

Geometric match to HL_5O7H_001

Geometric discrepancy: 0.2024

The information below is about HL_5O7H_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

302

Unit IDs

2I7Z|5|A|G|19
2I7Z|5|A|G|20
2I7Z|5|A|A|21
2I7Z|5|A|A|22
2I7Z|5|A|A|23
2I7Z|5|A|C|24

Current chains

Chain A

43-MER

Nearby chains

Chain B

43-MER