HL_2IL9_003
3D structure
- PDB id
- 2IL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Plautia Stali Intestine Virus Intergenic Region Internal Ribosome Entry Site Ribosomal Binding Domain RNA at 3.1 Angstroms
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
2IL9|1|A|C|6119
2IL9|1|A|G|6119|||A
2IL9|1|A|A|6119|||B
2IL9|1|A|A|6119|||C
2IL9|1|A|A|6119|||D
2IL9|1|A|G|6119|||E
Current chains
- Chain A
- Ribosomal Binding Domain of the IRES RNA
Nearby chains
No other chains within 10ÅColoring options: