HL_2J28_005
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2J28_005 not in the Motif Atlas
- Homologous match to HL_5J7L_135
- Geometric discrepancy: 0.1875
- The information below is about HL_5J7L_135
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80241.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
2J28|1|B|U|87
2J28|1|B|G|88
2J28|1|B|A|89
2J28|1|B|U|90
2J28|1|B|A|91
2J28|1|B|U|92
2J28|1|B|G|93
2J28|1|B|A|94
2J28|1|B|A|95
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain T
- 50S RIBOSOMAL PROTEIN L23
- Chain U
- 50S RIBOSOMAL PROTEIN L24
- Chain X
- 50S RIBOSOMAL PROTEIN L29
Coloring options: