HL_2J28_043
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 2J28|1|B|A|1614, 2J28|1|B|A|1616, 2J28|1|B|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2J28_043 not in the Motif Atlas
- Homologous match to HL_7RQB_040
- Geometric discrepancy: 0.0835
- The information below is about HL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64430.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
2J28|1|B|C|1612
2J28|1|B|G|1613
2J28|1|B|A|1614
2J28|1|B|C|1615
2J28|1|B|A|1616
2J28|1|B|C|1617
2J28|1|B|A|1618
2J28|1|B|G|1619
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: