HL_2J28_052

3D structure

PDB id

2J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

MODEL OF E. COLI SRP BOUND TO 70S RNCS

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

2J28|1|B|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2J28_052 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.0842

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

2J28|1|B|G|1949
2J28|1|B|G|1950
2J28|1|B|U|1951
2J28|1|B|A|1952
2J28|1|B|A|1953
2J28|1|B|G|1954
2J28|1|B|U|1955
2J28|1|B|U|1956
2J28|1|B|C|1957

Current chains

Chain B

23S RIBOSOMAL RNA

Nearby chains

Chain K

50S RIBOSOMAL PROTEIN L14