HL_2JL6_012
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 2JL6|1|A|G|329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2JL6_012 not in the Motif Atlas
- Geometric match to HL_7RQB_012
- Geometric discrepancy: 0.0594
- The information below is about HL_7RQB_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.9
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 19
Unit IDs
2JL6|1|A|G|327
2JL6|1|A|U|328
2JL6|1|A|G|329
2JL6|1|A|A|330
2JL6|1|A|A|331
2JL6|1|A|A|332
2JL6|1|A|G|333
2JL6|1|A|C|334
2JL6|1|A|C|335
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain F
- 50S RIBOSOMAL PROTEIN L4
- Chain Y
- 50S RIBOSOMAL PROTEIN L24
Coloring options: