2JL6 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2JL6_001 | 1/A/59:68 | No text annotation | geometric HL_7RQB_001 NA | |
| HL_2JL6_002 | 1/A/87:95 | Externally structured | geometric HL_5TBW_022 NA | |
| HL_2JL6_003 | 1/A/123:128 | No text annotation | geometric HL_5J7L_136 NA | |
| HL_2JL6_004 | 1/A/139:142A | No text annotation | geometric HL_7RQB_004 NA | |
| HL_2JL6_005 | 1/A/154:172 | No text annotation | ||
| HL_2JL6_006 | 1/A/194:201 | No text annotation | geometric HL_5J7L_139 NA | |
| HL_2JL6_007 | 1/A/225:230 | No text annotation | geometric HL_7RQB_007 NA | |
| HL_2JL6_008 | 1/A/246:252 | No text annotation | geometric HL_4WF9_008 HL_76371.2 | |
| HL_2JL6_009 | 1/A/271J:271M | No text annotation | ||
| HL_2JL6_010 | 1/A/305:312 | No text annotation | geometric HL_7RQB_010 NA | |
| HL_2JL6_011 | 1/A/319:323 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_2JL6_012 | 1/A/327:335 | T-loop with unstacked turn | geometric HL_7RQB_012 NA | |
| HL_2JL6_014 | 1/A/410:417 | No text annotation | geometric HL_7RQB_014 NA | |
| HL_2JL6_015 | 1/A/462:467 | GNRA | geometric HL_7RQB_015 NA | |
| HL_2JL6_016 | 1/A/487:493 | GNRA | geometric HL_7RQB_016 NA | |
| HL_2JL6_017 | 1/A/543:549 | GNRA | geometric HL_4V9F_028 HL_34789.4 | |
| HL_2JL6_018 | 1/A/566:575 | No text annotation | geometric HL_7RQB_018 NA | |
| HL_2JL6_019 | 1/A/612:615 | No text annotation | geometric HL_7RQB_019 NA | |
| HL_2JL6_020 | 1/A/629:634 | GNRA | geometric HL_7RQB_020 NA | |
| HL_2JL6_021 | 1/A/641:647 | GNRA | geometric HL_4WF9_021 HL_34789.4 | |
| HL_2JL6_022 | 1/A/654H:654M | No text annotation | geometric HL_5TBW_044 NA | |
| HL_2JL6_023 | 1/A/712:719 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_2JL6_024 | 1/A/744:753 | No text annotation | geometric HL_7RQB_023 NA | |
| HL_2JL6_025 | 1/A/779:785 | UNCG variation | geometric HL_7A0S_023 HL_51020.2 | |
| HL_2JL6_026 | 1/A/826:831 | No text annotation | geometric HL_7RQB_025 NA | |
| HL_2JL6_027 | 1/A/879:898 | No text annotation | geometric HL_5ID6_001 HL_69752.4 | |
| HL_2JL6_028 | 1/A/955:962 | GNRA | geometric HL_7RQB_027 NA | |
| HL_2JL6_029 | 1/A/978:985 | No text annotation | geometric HL_7RQB_028 NA | |
| HL_2JL6_030 | 1/A/1064:1074 | No text annotation | geometric HL_5D8H_001 HL_20174.1 | |
| HL_2JL6_031 | 1/A/1091:1100 | No text annotation | geometric HL_6CF2_001 HL_92598.1 | |
| HL_2JL6_032 | 1/A/1171:1178 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_2JL6_033 | 1/A/1222:1227 | GNRA | geometric HL_7RQB_032 NA | |
| HL_2JL6_034 | 1/A/1281:1289 | No text annotation | geometric HL_7RQB_033 NA | |
| HL_2JL6_035 | 1/A/1324:1330 | Pseudoknot geometry with 3' bulge | geometric HL_4WF9_033 HL_49081.1 | |
| HL_2JL6_036 | 1/A/1363:1368 | GNRA | geometric HL_5J7L_167 NA | |
| HL_2JL6_037 | 1/A/1389:1398 | No text annotation | geometric HL_7RQB_036 NA | |
| HL_2JL6_038 | 1/A/1450A:1461 | No text annotation | geometric HL_8C3A_203 NA | |
| HL_2JL6_039 | 1/A/1492:1498 | No text annotation | ||
| HL_2JL6_040 | 1/A/1526:1546 | UNCG variation | geometric HL_2CZJ_007 NA | |
| HL_2JL6_041 | 1/A/1565:1568 | No text annotation | geometric HL_7RQB_039 NA | |
| HL_2JL6_042 | 1/A/1612:1619 | No text annotation | geometric HL_7RQB_040 NA | |
| HL_2JL6_043 | 1/A/1631:1635 | No text annotation | geometric HL_7RQB_041 NA | |
| HL_2JL6_044 | 1/A/1691:1696 | No text annotation | geometric HL_7RQB_042 NA | |
| HL_2JL6_046 | 1/A/1752:1756 | No text annotation | geometric HL_7RQB_044 NA | |
| HL_2JL6_047 | 1/A/1777:1787 | No text annotation | geometric HL_5J7L_178 NA | |
| HL_2JL6_048 | 1/A/1806:1811 | GNRA | geometric HL_7RQB_046 NA | |
| HL_2JL6_049 | 1/A/1864:1878 | GNRA | geometric HL_7RQB_047 NA | |
| HL_2JL6_050 | 1/A/1910:1920 | No text annotation | geometric HL_5TBW_049 NA | |
| HL_2JL6_051 | 1/A/1949:1957 | No text annotation | geometric HL_7RQB_049 NA | |
| HL_2JL6_052 | 1/A/2027:2036 | No text annotation | geometric HL_7RQB_050 NA | |
| HL_2JL6_053 | 1/A/2127:2161 | No text annotation | ||
| HL_2JL6_054 | 1/A/2205:2219 | No text annotation | geometric HL_5TBW_004 NA | |
| HL_2JL6_055 | 1/A/2248:2256 | No text annotation | geometric HL_4WF9_049 HL_11974.2 | |
| HL_2JL6_056 | 1/A/2264:2276 | No text annotation | geometric HL_7RQB_054 NA | |
| HL_2JL6_058 | 1/A/2324:2331 | Pseudoknot geometry | geometric HL_7RQB_056 NA | |
| HL_2JL6_059 | 1/A/2355:2362 | No text annotation | geometric HL_7RQB_057 NA | |
| HL_2JL6_060 | 1/A/2374:2379 | GNRA | geometric HL_7RQB_058 NA | |
| HL_2JL6_061 | 1/A/2404:2413 | No text annotation | geometric HL_7RQB_059 NA | |
| HL_2JL6_062 | 1/A/2471:2479 | No text annotation | geometric HL_7RQB_060 NA | |
| HL_2JL6_063 | 1/A/2528:2535 | No text annotation | geometric HL_7RQB_061 NA | |
| HL_2JL6_064 | 1/A/2551:2557 | No text annotation | geometric HL_4WF9_058 HL_48677.1 | |
| HL_2JL6_065 | 1/A/2594:2599 | GNRA | geometric HL_7RQB_063 NA | |
| HL_2JL6_066 | 1/A/2658:2663 | GNRA related | geometric HL_5J7L_179 NA | |
| HL_2JL6_067 | 1/A/2701:2706 | Externally structured | geometric HL_5TBW_022 NA | |
| HL_2JL6_068 | 1/A/2745:2759 | No text annotation | geometric HL_7RQB_066 NA | |
| HL_2JL6_069 | 1/A/2792:2804 | No text annotation | ||
| HL_2JL6_070 | 1/A/2819:2827 | No text annotation | geometric HL_7RQB_068 NA | |
| HL_2JL6_071 | 1/A/2856:2861 | GNRA | geometric HL_7RQB_069 NA | |
| HL_2JL6_072 | 1/B/38:44 | No text annotation | geometric HL_5J7L_203 NA | |
| HL_2JL6_073 | 1/B/86:91 | GNRA | geometric HL_7RQB_071 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2JL6_013 | No text annotation | ||
| HL_2JL6_045 | No text annotation | ||
| HL_2JL6_057 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2JL6_001 | 1/A/24:30, 1/A/510:516 | Triple sheared with non-canonical cWW | geometric IL_7RQB_001 NA | |
| IL_2JL6_002 | 1/A/36:37, 1/A/442:444 | Single bulged A | geometric IL_7A0S_002 IL_14190.2 | |
| IL_2JL6_003 | 1/A/42:43, 1/A/434:436 | Minor groove platform | geometric IL_7RQB_003 NA | |
| IL_2JL6_004 | 1/A/81:85, 1/A/97:105 | Kink-turn | geometric IL_7RQB_004 NA | |
| IL_2JL6_005 | 1/A/183:184, 1/A/212:214 | Single stack bend | geometric IL_7RQB_005 NA | |
| IL_2JL6_006 | 1/A/188:194, 1/A/201:208 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_7RQB_006 NA | |
| IL_2JL6_007 | 1/A/239:245, 1/A/253:258 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_7RQB_007 NA | |
| IL_2JL6_008 | 1/A/271I:271J, 1/A/271M:271O | Single bulged U | geometric IL_5FQ5_002 IL_97561.5 | |
| IL_2JL6_010 | 1/A/272J:280, 1/A/360:363 | No text annotation | ||
| IL_2JL6_011 | 1/A/280:284, 1/A/357:360 | tSH-tHW | geometric IL_7RQB_011 NA | |
| IL_2JL6_012 | 1/A/288:290, 1/A/350:353 | Isolated tHS basepair with bulges | geometric IL_7RQB_012 NA | |
| IL_2JL6_013 | 1/A/293:295, 1/A/343:347 | No text annotation | geometric IL_7RQB_013 NA | |
| IL_2JL6_014 | 1/A/481:484, 1/A/496:509 | No text annotation | geometric IL_7RQB_014 NA | |
| IL_2JL6_015 | 1/A/564:566, 1/A/575:577 | No text annotation | geometric IL_7RQB_015 NA | |
| IL_2JL6_016 | 1/A/606:610, 1/A/618:622 | AAA cross-strand stack | geometric IL_7RQB_016 NA | |
| IL_2JL6_017 | 1/A/672:674, 1/A/806:808 | Isolated non-canonical cWW pair | geometric IL_7A0S_014 IL_01003.4 | |
| IL_2JL6_018 | 1/A/674:678, 1/A/799:806 | tHW-tHW cross-strand stack | geometric IL_4WF9_021 IL_73855.1 | |
| IL_2JL6_019 | 1/A/697:698, 1/A/763:765 | Single bulged A | geometric IL_7RQB_019 NA | |
| IL_2JL6_020 | 1/A/702:703, 1/A/728:730 | Single bulged G | geometric IL_7RQB_020 NA | |
| IL_2JL6_021 | 1/A/703:707, 1/A/724:728 | Triple sheared | geometric IL_7RQB_021 NA | |
| IL_2JL6_022 | 1/A/738:741, 1/A/756:758 | Major groove platform with extra cWW | geometric IL_7A0S_019 IL_36931.2 | |
| IL_2JL6_023 | 1/A/775:777, 1/A/787:791 | Multiple bulged bases | geometric IL_7RQB_023 NA | |
| IL_2JL6_024 | 1/A/837:838, 1/A/940:942 | Single stack bend | geometric IL_4WF9_028 IL_15011.3 | |
| IL_2JL6_025 | 1/A/844:846, 1/A/931:934 | Intercalated cWW | geometric IL_7RQB_025 NA | |
| IL_2JL6_026 | 1/A/846:850, 1/A/927:931 | No text annotation | geometric IL_7RQB_026 NA | |
| IL_2JL6_027 | 1/A/858:862, 1/A/915:919 | 5x5 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_7RQB_027 NA | |
| IL_2JL6_028 | 1/A/862:863, 1/A/913:915 | Minor groove platform | geometric IL_7A0S_028 IL_34520.3 | |
| IL_2JL6_029 | 1/A/864:868, 1/A/909:912 | C-loop | geometric IL_7RQB_029 NA | |
| IL_2JL6_030 | 1/A/870:872, 1/A/905:907 | Isolated cWS basepair | geometric IL_7RQB_030 NA | |
| IL_2JL6_031 | 1/A/875:877, 1/A/899:902 | Minor groove platform with extra cWW | geometric IL_7RQB_031 NA | |
| IL_2JL6_032 | 1/A/877:879, 1/A/898:899 | Minor groove platform | geometric IL_7RQB_032 NA | |
| IL_2JL6_033 | 1/A/952:954, 1/A/963:965 | No text annotation | geometric IL_7RQB_034 NA | |
| IL_2JL6_034 | 1/A/994:996, 1/A/1159:1160 | Single bulged C | geometric IL_7RQB_035 NA | |
| IL_2JL6_035 | 1/A/998:1002, 1/A/1153:1157 | UAA/GAN | geometric IL_7RQB_036 NA | |
| IL_2JL6_036 | 1/A/1004:1011, 1/A/1150:1151 | SSU/LSU pseudoknot | geometric IL_5J7L_278 NA | |
| IL_2JL6_037 | 1/A/1011:1013, 1/A/1149:1150 | Single bulged U | geometric IL_5J7L_279 NA | |
| IL_2JL6_038 | 1/A/1018:1024, 1/A/1140:1144 | Kink-turn related | geometric IL_4WF9_039 IL_57188.6 | |
| IL_2JL6_039 | 1/A/1024:1030, 1/A/1124:1140 | No text annotation | geometric IL_7RQB_040 NA | |
| IL_2JL6_040 | 1/A/1031:1034, 1/A/1121:1123 | Isolated non-canonical cWW pair | geometric IL_4WF9_041 IL_76400.1 | |
| IL_2JL6_041 | 1/A/1043:1053, 1/A/1106:1112 | No text annotation | ||
| IL_2JL6_042 | 1/A/1059:1062, 1/A/1076:1079 | No text annotation | geometric IL_6PRV_001 IL_28482.1 | |
| IL_2JL6_043 | 1/A/1087:1091, 1/A/1100:1102 | Major groove platform with extra cWW | geometric IL_1MMS_002 NA | |
| IL_2JL6_044 | 1/A/1196:1198, 1/A/1247:1250 | Isolated cWS basepair | geometric IL_7RQB_045 NA | |
| IL_2JL6_045 | 1/A/1202:1206, 1/A/1240:1243 | No text annotation | geometric IL_7RQB_046 NA | |
| IL_2JL6_046 | 1/A/1208:1215, 1/A/1234:1238 | Kink-turn | geometric IL_7RQB_047 NA | |
| IL_2JL6_047 | 1/A/1219:1221, 1/A/1229:1230 | Single bulged A | geometric IL_7RQB_048 NA | |
| IL_2JL6_048 | 1/A/1262:1269, 1/A/2011:2017 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_7RQB_049 NA | |
| IL_2JL6_049 | 1/A/1310:1313, 1/A/1603:1604 | Major groove platform; stack outside cWW | geometric IL_7RQB_050 NA | |
| IL_2JL6_050 | 1/A/1319:1323, 1/A/1331:1333 | C-loop | geometric IL_7RQB_051 NA | |
| IL_2JL6_051 | 1/A/1351:1355, 1/A/1376:1380 | UAA/GAN | geometric IL_7RQB_052 NA | |
| IL_2JL6_052 | 1/A/1357:1361, 1/A/1370:1374 | tSH-tHW-tHS | geometric IL_4V88_418 NA | |
| IL_2JL6_053 | 1/A/1415:1416, 1/A/1582:1587 | No text annotation | geometric IL_7RQB_054 NA | |
| IL_2JL6_054 | 1/A/1417:1421, 1/A/1577:1581 | UAA/GAN | geometric IL_5J7L_295 NA | |
| IL_2JL6_055 | 1/A/1433:1435, 1/A/1557:1560 | Isolated tWW turn | geometric IL_7RQB_056 NA | |
| IL_2JL6_056 | 1/A/1437:1440, 1/A/1551:1555 | tSH-tHW | geometric IL_7RQB_057 NA | |
| IL_2JL6_057 | 1/A/1448:1450, 1/A/1462:1463 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_2JL6_058 | 1/A/1469:1473, 1/A/1518:1523 | UAA/GAN variation | geometric IL_7RQB_060 NA | |
| IL_2JL6_059 | 1/A/1481:1482, 1/A/1506:1510 | No text annotation | geometric IL_7RQB_061 NA | |
| IL_2JL6_060 | 1/A/1489:1491, 1/A/1499:1500 | Single bulged A | geometric IL_2OZB_001 NA | |
| IL_2JL6_061 | 1/A/1651:1656, 1/A/2004:2006 | No text annotation | geometric IL_7RQB_064 NA | |
| IL_2JL6_062 | 1/A/1663:1665, 1/A/1995:1997 | Isolated tWW turn | geometric IL_7RQB_065 NA | |
| IL_2JL6_063 | 1/A/1666:1669, 1/A/1993:1994 | Major groove platform; stack outside cWW | geometric IL_7RQB_066 NA | |
| IL_2JL6_064 | 1/A/1669:1674, 1/A/1990:1993 | Intercalated tWH | geometric IL_7RQB_067 NA | |
| IL_2JL6_065 | 1/A/1686:1691, 1/A/1696:1702 | tSH-tSH-tHH-tHS | geometric IL_7RQB_068 NA | |
| IL_2JL6_066 | 1/A/1770:1771, 1/A/1980:1982 | Single bulged A | geometric IL_7RQB_069 NA | |
| IL_2JL6_067 | 1/A/1798:1804, 1/A/1813:1821 | Kink-turn related | geometric IL_7RQB_070 NA | |
| IL_2JL6_068 | 1/A/1837:1840, 1/A/1902:1903 | Minor groove platform, major groove intercalation | geometric IL_4V9F_066 IL_55206.1 | |
| IL_2JL6_069 | 1/A/1841:1842, 1/A/1898:1901 | Major groove intercalation | geometric IL_5J7L_315 NA | |
| IL_2JL6_070 | 1/A/1846:1849, 1/A/1893:1894 | Minor groove platform | geometric IL_7RQB_073 NA | |
| IL_2JL6_071 | 1/A/1851:1855, 1/A/1887:1891 | UAA/GAN with extra stack | geometric IL_4WF9_073 IL_89021.4 | |
| IL_2JL6_072 | 1/A/1856:1860, 1/A/1882:1886 | Triple sheared | geometric IL_7RQB_075 NA | |
| IL_2JL6_073 | 1/A/1933:1934, 1/A/1964:1967 | Bulged stacked bases | geometric IL_7RQB_076 NA | |
| IL_2JL6_074 | 1/A/1934:1945, 1/A/1961:1964 | No text annotation | geometric IL_4WF9_077 IL_84014.1 | |
| IL_2JL6_075 | 1/A/2050:2052, 1/A/2617:2618 | Major groove platform | geometric IL_7RQB_078 NA | |
| IL_2JL6_076 | 1/A/2054:2057, 1/A/2611:2615 | No text annotation | geometric IL_7RQB_079 NA | |
| IL_2JL6_077 | 1/A/2067:2069, 1/A/2442:2443 | Single bulged U | geometric IL_7RQB_080 NA | |
| IL_2JL6_078 | 1/A/2070:2071, 1/A/2438:2441 | Minor groove platform | geometric IL_7RQB_081 NA | |
| IL_2JL6_079 | 1/A/2081:2083, 1/A/2236:2239 | Isolated tHS basepair with bulges | geometric IL_7RQB_082 NA | |
| IL_2JL6_080 | 1/A/2085:2087, 1/A/2232:2234 | No text annotation | geometric IL_7RQB_083 NA | |
| IL_2JL6_081 | 1/A/2105:2110, 1/A/2179:2184 | No text annotation | geometric IL_5TBW_476 NA | |
| IL_2JL6_083 | 1/A/2124:2127, 1/A/2161:2174 | No text annotation | geometric IL_3U4M_003 IL_75283.2 | |
| IL_2JL6_084 | 1/A/2297:2299, 1/A/2317:2321 | Isolated tHS basepair with bulges | geometric IL_7RQB_088 NA | |
| IL_2JL6_085 | 1/A/2350:2353, 1/A/2364:2367 | Double sheared | geometric IL_7RQB_089 NA | |
| IL_2JL6_086 | 1/A/2401:2403, 1/A/2414:2415 | Major groove platform | homologous IL_7A0S_082 IL_48076.8 | |
| IL_2JL6_087 | 1/A/2453:2454, 1/A/2498:2500 | Single stack bend | geometric IL_7RQB_091 NA | |
| IL_2JL6_088 | 1/A/2454:2455, 1/A/2496:2498 | Major groove platform | geometric IL_7RQB_092 NA | |
| IL_2JL6_089 | 1/A/2457:2459, 1/A/2493:2494 | Major groove platform | geometric IL_4WF9_091 IL_48076.8 | |
| IL_2JL6_090 | 1/A/2459:2461, 1/A/2489:2493 | Major groove minor groove platform with extra cWW | geometric IL_5J7L_337 NA | |
| IL_2JL6_091 | 1/A/2466:2470, 1/A/2480:2484 | Triple sheared | geometric IL_7RQB_095 NA | |
| IL_2JL6_092 | 1/A/2507:2508, 1/A/2580:2582 | Major groove platform | geometric IL_4WF9_094 IL_46637.2 | |
| IL_2JL6_093 | 1/A/2510:2512, 1/A/2574:2578 | Isolated non-canonical cWW with bulges | geometric IL_5J7L_340 NA | |
| IL_2JL6_094 | 1/A/2512:2513, 1/A/2571:2574 | Multiple bulged bases | geometric IL_7RQB_098 NA | |
| IL_2JL6_095 | 1/A/2522:2523, 1/A/2540:2543 | Major groove platform with intercalation | geometric IL_7RQB_099 NA | |
| IL_2JL6_096 | 1/A/2591:2592, 1/A/2601:2603 | Single bulged A | geometric IL_1U9S_001 IL_14190.2 | |
| IL_2JL6_097 | 1/A/2636:2640, 1/A/2774:2782 | tSH-tHS-tHW | geometric IL_7RQB_102 NA | |
| IL_2JL6_098 | 1/A/2652:2658, 1/A/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge | geometric IL_5J7L_346 NA | |
| IL_2JL6_099 | 1/A/2680:2684, 1/A/2725:2727 | C-loop | geometric IL_7RQB_104 NA | |
| IL_2JL6_100 | 1/A/2687:2691, 1/A/2718:2722 | No text annotation | geometric IL_7RQB_105 NA | |
| IL_2JL6_101 | 1/A/2695:2696, 1/A/2711:2714 | Multiple bulged bases | geometric IL_7RQB_106 NA | |
| IL_2JL6_102 | 1/A/2737:2742, 1/A/2762:2767 | UAA/GAN with extra cWW | geometric IL_7RQB_107 NA | |
| IL_2JL6_103 | 1/A/2838:2839, 1/A/2878:2880 | Single bulged C | geometric IL_7RQB_108 NA | |
| IL_2JL6_104 | 1/A/2843:2846, 1/A/2870:2874 | No text annotation | geometric IL_7RQB_109 NA | |
| IL_2JL6_105 | 1/A/2847:2852, 1/A/2865:2869 | tHS double platform | geometric IL_7RQB_110 NA | |
| IL_2JL6_106 | 1/B/17:18, 1/B/65:67 | Major groove intercalation | geometric IL_4WF9_112 IL_14190.2 | |
| IL_2JL6_107 | 1/B/23:28, 1/B/56:60 | No text annotation | geometric IL_5J7L_356 NA | |
| IL_2JL6_108 | 1/B/30:31, 1/B/51:54 | Major groove minor groove platform; mini C-loop | geometric IL_7RQB_113 NA | |
| IL_2JL6_109 | 1/B/34:38, 1/B/44:48 | Symmetric double minor groove platform | geometric IL_7RQB_114 NA | |
| IL_2JL6_110 | 1/B/71:79, 1/B/98:106 | Bacterial 5S Loop E | geometric IL_7RQB_115 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2JL6_009 | No text annotation | ||
| IL_2JL6_082 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_2JL6_001 | 1/A/30:31, 1/A/474:481, 1/A/509:510 | No text annotation | geometric J3_8VTW_036 NA | |
| J3_2JL6_002 | 1/A/56:57, 1/A/70:76, 1/A/110:114 | No text annotation | geometric J3_7A0S_002 J3_01004.1 | |
| J3_2JL6_003 | 1/A/269:271B, 1/A/271V:272B, 1/A/366:370 | No text annotation | geometric J3_8VTW_040 NA | |
| J3_2JL6_004 | 1/A/683:689, 1/A/773:775, 1/A/791:794 | No text annotation | geometric J3_7A0S_004 J3_46658.1 | |
| J3_2JL6_005 | 1/A/698:700, 1/A/732:736, 1/A/760:763 | No text annotation | geometric J3_8VTW_002 NA | |
| J3_2JL6_006 | 1/A/1055:1057, 1/A/1081:1087, 1/A/1102:1104 | No text annotation | geometric J3_6PRV_001 J3_37832.1 | |
| J3_2JL6_007 | 1/A/1298:1303, 1/A/1625:1627, 1/A/1639:1642 | No text annotation | geometric J3_8VTW_004 NA | |
| J3_2JL6_008 | 1/A/1306:1309, 1/A/1605:1611, 1/A/1620:1622 | No text annotation | geometric J3_8VTW_005 NA | |
| J3_2JL6_009 | 1/A/1344:1350, 1/A/1381:1385, 1/A/1402:1403 | No text annotation | geometric J3_8VTW_043 NA | |
| J3_2JL6_010 | 1/A/2091:2093, 1/A/2196:2200, 1/A/2223:2228 | No text annotation | geometric J3_8VTW_006 NA | |
| J3_2JL6_011 | 1/A/2295:2297, 1/A/2321:2323, 1/A/2332:2337 | No text annotation | geometric J3_8VTW_007 NA | |
| J3_2JL6_012 | 1/A/2517:2520, 1/A/2545:2547, 1/A/2561:2567 | No text annotation | geometric J3_8VTW_008 NA | |
| J3_2JL6_013 | 1/A/2814:2815, 1/A/2831:2836, 1/A/2882:2886 | No text annotation | geometric J3_8VTW_046 NA | |
| J3_2JL6_014 | 1/B/11:16, 1/B/68:69, 1/B/108:110 | No text annotation | geometric J3_8VTW_047 NA |
Problematic loops
No problematic loops
Coloring options: