HL_2JL6_014

3D structure

PDB id

2JL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

2JL6|1|A|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL6_014 not in the Motif Atlas

Geometric match to HL_7RQB_014

Geometric discrepancy: 0.0828

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

2JL6|1|A|G|410
2JL6|1|A|G|411
2JL6|1|A|A|412
2JL6|1|A|C|413
2JL6|1|A|C|414
2JL6|1|A|A|415
2JL6|1|A|C|416
2JL6|1|A|C|417

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S RIBOSOMAL PROTEIN L28

Chain P

50S RIBOSOMAL PROTEIN L15