HL_2JL7_029
3D structure
- PDB id
- 2JL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 3 of 4). This file contains the 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GAUCAGCCAUGC
- Length
- 12 nucleotides
- Bulged bases
- 2JL7|1|A|U|1364
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2JL7_029 not in the Motif Atlas
- Geometric match to HL_4LFB_030
- Geometric discrepancy: 0.0923
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
2JL7|1|A|G|1356
2JL7|1|A|A|1357
2JL7|1|A|U|1358
2JL7|1|A|C|1359
2JL7|1|A|A|1360
2JL7|1|A|G|1361
2JL7|1|A|C|1362
2JL7|1|A|C|1363
2JL7|1|A|A|1363|||A
2JL7|1|A|U|1364
2JL7|1|A|G|1365
2JL7|1|A|C|1366
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14 TYPE Z
- Chain U
- 30S RIBOSOMAL PROTEIN THX
Coloring options: