HL_2JL7_030

3D structure

PDB id

2JL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 3 of 4). This file contains the 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

2JL7|1|A|A|1447

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL7_030 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2933

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

2JL7|1|A|C|1444
2JL7|1|A|C|1445
2JL7|1|A|U|1446
2JL7|1|A|A|1447
2JL7|1|A|C|1452
2JL7|1|A|G|1456
2JL7|1|A|G|1457
2JL7|1|A|G|1458

Current chains

Chain A

16S RRNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20