HL_2JL7_031

3D structure

PDB id

2JL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 3 of 4). This file contains the 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL7_031 not in the Motif Atlas

Geometric match to HL_4V88_222

Geometric discrepancy: 0.1297

The information below is about HL_4V88_222

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

2JL7|1|A|C|1515
2JL7|1|A|G|1516
2JL7|1|A|G|1517
2JL7|1|A|A|1518
2JL7|1|A|A|1519
2JL7|1|A|G|1520

Current chains

Chain A

16S RRNA

Nearby chains