HL_2JL7_036
3D structure
- PDB id
- 2JL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 3 of 4). This file contains the 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GAUUGAAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2JL7_036 not in the Motif Atlas
- Geometric match to HL_4V7M_039
- Geometric discrepancy: 0.3512
- The information below is about HL_4V7M_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
2JL7|1|W|G|30
2JL7|1|W|A|31
2JL7|1|W|U|32
2JL7|1|W|U|33
2JL7|1|W|G|34
2JL7|1|W|A|35
2JL7|1|W|A|36
2JL7|1|W|A|37
2JL7|1|W|A|38
2JL7|1|W|U|39
2JL7|1|W|C|40
Current chains
- Chain W
- E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain G
- 30S RIBOSOMAL PROTEIN S7
- Chain K
- 30S RIBOSOMAL PROTEIN S11
- Chain V
- Transfer RNA; tRNA
- Chain X
- MRNA
Coloring options: