HL_2L3E_005

3D structure

PDB id

2L3E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of P2a-J2a/b-P2b of human telomerase RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2L3E_005 not in the Motif Atlas

Geometric match to HL_2NUE_001

Geometric discrepancy: 0.275

The information below is about HL_2NUE_001

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

2L3E|5|A|C|18
2L3E|5|A|U|19
2L3E|5|A|U|20
2L3E|5|A|C|21
2L3E|5|A|G|22
2L3E|5|A|G|23

Current chains

Chain A

35-MER

Nearby chains