HL_2LUN_008

3D structure

PDB id

2LUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA Aptamer for B. anthracis Ribosomal Protein S8

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2LUN_008 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3156

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

2LUN|8|A|C|12
2LUN|8|A|U|13
2LUN|8|A|U|14
2LUN|8|A|C|15
2LUN|8|A|G|16
2LUN|8|A|G|17

Current chains

Chain A

RNA (28-MER)

Nearby chains