HL_2MHI_009

3D structure

PDB id

2MHI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of the CR4/5 domain of medaka telomerase RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CUCGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2MHI_009 not in the Motif Atlas

Geometric match to HL_6CZR_089

Geometric discrepancy: 0.1755

The information below is about HL_6CZR_089

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

2MHI|5|A|C|18
2MHI|5|A|U|19
2MHI|5|A|C|20
2MHI|5|A|G|21
2MHI|5|A|G|22

Current chains

Chain A

Medaka telomerase RNA

Nearby chains