RNA 3D Hub //

2MHI Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_2MHI_0011/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0021/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0032/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0042/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0053/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0063/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0074/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0084/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0095/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0105/A/35:41No text annotation
geometric
HL_8C3A_054
NA
HL_2MHI_0116/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0126/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0137/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0147/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0158/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0168/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_0179/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_0189/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_01910/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_02010/A/35:41No text annotation
geometric
HL_4WF9_003
HL_75660.9
HL_2MHI_02111/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_02211/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_02312/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_02412/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_02513/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_02613/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_02714/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_02814/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_02915/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_03015/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_03116/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_03216/A/35:41No text annotation
geometric
HL_5J7L_143
NA
HL_2MHI_03317/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_03417/A/35:41No text annotation
geometric
HL_4WF9_003
HL_75660.9
HL_2MHI_03518/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_03618/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9
HL_2MHI_03719/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_03819/A/35:41No text annotation
geometric
HL_5WTI_001
HL_58375.1
HL_2MHI_03920/A/18:22Mini UNCG
geometric
HL_6CZR_089
NA
HL_2MHI_04020/A/35:41No text annotation
geometric
HL_5U3G_001
HL_75660.9

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_2MHI_0011/A/13:15,
1/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0021/A/30:33,
1/A/43:44		No text annotation
IL_2MHI_0572/A/7:8,
2/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_0032/A/13:15,
2/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0042/A/30:33,
2/A/43:44		No text annotation
IL_2MHI_0053/A/7:8,
3/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_0063/A/13:15,
3/A/25:26		No text annotation
IL_2MHI_0493/A/30:33,
3/A/43:44		No text annotation
IL_2MHI_0084/A/13:15,
4/A/25:26		No text annotation
IL_2MHI_0094/A/30:33,
4/A/43:44		No text annotation
IL_2MHI_0105/A/13:15,
5/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0115/A/30:33,
5/A/43:44		No text annotation
IL_2MHI_0126/A/7:8,
6/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_0136/A/13:15,
6/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0146/A/30:33,
6/A/43:44		No text annotation
IL_2MHI_0157/A/13:15,
7/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0167/A/30:33,
7/A/43:44		No text annotation
IL_2MHI_0178/A/13:15,
8/A/25:26		No text annotation
IL_2MHI_0188/A/30:33,
8/A/43:44		No text annotation
IL_2MHI_0199/A/13:15,
9/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_0209/A/30:33,
9/A/43:44		No text annotation
IL_2MHI_02110/A/7:8,
10/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_02210/A/13:15,
10/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_02310/A/30:33,
10/A/43:44		No text annotation
IL_2MHI_02411/A/13:15,
11/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_02511/A/30:33,
11/A/43:44		No text annotation
IL_2MHI_02612/A/13:15,
12/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_02712/A/30:33,
12/A/43:44		No text annotation
IL_2MHI_02813/A/13:15,
13/A/25:26		No text annotation
IL_2MHI_05813/A/30:33,
13/A/43:44		No text annotation
IL_2MHI_05914/A/7:8,
14/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_03014/A/13:15,
14/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_03114/A/30:33,
14/A/43:44		No text annotation
IL_2MHI_03215/A/13:15,
15/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_03315/A/30:33,
15/A/43:44		No text annotation
IL_2MHI_06016/A/13:15,
16/A/25:26		Major groove intercalation
geometric
IL_3IWN_003
IL_97561.6
IL_2MHI_03516/A/30:33,
16/A/43:44		No text annotation
IL_2MHI_03617/A/13:15,
17/A/25:26		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.6
IL_2MHI_03717/A/30:33,
17/A/43:44		No text annotation
IL_2MHI_03818/A/7:8,
18/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_06118/A/13:15,
18/A/25:26		No text annotation
IL_2MHI_05418/A/30:33,
18/A/43:44		No text annotation
IL_2MHI_06219/A/7:8,
19/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_04219/A/13:15,
19/A/25:26		No text annotation
geometric
IL_9AXU_122
IL_97561.6
IL_2MHI_05519/A/30:33,
19/A/43:44		No text annotation
IL_2MHI_04420/A/7:8,
20/A/45:47		Single stack bend
geometric
IL_7KGA_006
IL_15011.4
IL_2MHI_06320/A/13:15,
20/A/25:26		No text annotation
IL_2MHI_04620/A/30:33,
20/A/43:44		No text annotation

Problematic loops

#loop idProblemSequence
IL_2MHI_047No text annotation
IL_2MHI_048No text annotation
IL_2MHI_007No text annotation
IL_2MHI_050No text annotation
IL_2MHI_051No text annotation
IL_2MHI_029No text annotation
IL_2MHI_052No text annotation
IL_2MHI_034No text annotation
IL_2MHI_053No text annotation
IL_2MHI_039No text annotation
IL_2MHI_040No text annotation
IL_2MHI_041No text annotation
IL_2MHI_043No text annotation
IL_2MHI_056No text annotation
IL_2MHI_045No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_2MHI_0011/A/7:10,
1/A/29:30,
1/A/44:47		No text annotation
J3_2MHI_0222/A/8:10,
2/A/29:30,
2/A/44:45		No text annotation
J3_2MHI_0033/A/8:10,
3/A/29:30,
3/A/44:45		No text annotation
J3_2MHI_0044/A/7:10,
4/A/29:30,
4/A/44:47		No text annotation
J3_2MHI_0055/A/7:10,
5/A/29:30,
5/A/44:47		No text annotation
J3_2MHI_0066/A/8:10,
6/A/29:30,
6/A/44:45		No text annotation
J3_2MHI_0077/A/6:10,
7/A/29:30,
7/A/44:48		No text annotation
J3_2MHI_0347/A/7:11,
7/A/28:30,
7/A/44:47		No text annotation
J3_2MHI_0088/A/7:10,
8/A/29:30,
8/A/44:47		No text annotation
J3_2MHI_0358/A/7:11,
8/A/28:30,
8/A/44:47		No text annotation
J3_2MHI_0099/A/7:10,
9/A/29:30,
9/A/44:47		No text annotation
J3_2MHI_0369/A/7:11,
9/A/28:30,
9/A/44:47		No text annotation
J3_2MHI_01010/A/8:10,
10/A/29:30,
10/A/44:45		No text annotation
J3_2MHI_03711/A/7:10,
11/A/29:30,
11/A/44:47		No text annotation
J3_2MHI_01212/A/7:10,
12/A/29:30,
12/A/44:47		No text annotation
J3_2MHI_03812/A/7:11,
12/A/28:30,
12/A/44:47		No text annotation
J3_2MHI_01313/A/7:10,
13/A/29:30,
13/A/44:47		No text annotation
J3_2MHI_03914/A/8:10,
14/A/29:30,
14/A/44:45		No text annotation
J3_2MHI_01515/A/7:10,
15/A/29:30,
15/A/44:47		No text annotation
J3_2MHI_01616/A/7:10,
16/A/29:30,
16/A/44:47		No text annotation
J3_2MHI_01717/A/7:10,
17/A/29:30,
17/A/44:47		No text annotation
J3_2MHI_01818/A/8:10,
18/A/29:30,
18/A/44:45		No text annotation
J3_2MHI_01919/A/8:10,
19/A/29:30,
19/A/44:45		No text annotation
J3_2MHI_02020/A/8:10,
20/A/29:30,
20/A/44:45		No text annotation

Problematic loops

#loop idProblemSequence
J3_2MHI_021No text annotation
J3_2MHI_002No text annotation
J3_2MHI_023No text annotation
J3_2MHI_024No text annotation
J3_2MHI_025No text annotation
J3_2MHI_026No text annotation
J3_2MHI_027No text annotation
J3_2MHI_011No text annotation
J3_2MHI_028No text annotation
J3_2MHI_029No text annotation
J3_2MHI_014No text annotation
J3_2MHI_030No text annotation
J3_2MHI_031No text annotation
J3_2MHI_032No text annotation
J3_2MHI_033No text annotation

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