HL_2MIY_030
3D structure
- PDB id
- 2MIY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
- Experimental method
- SOLUTION NMR
- Resolution
Loop
- Sequence
- GGAUAACC
- Length
- 8 nucleotides
- Bulged bases
- 2MIY|15|A|A|41, 2MIY|15|A|A|44
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2MIY_030 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.2163
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
2MIY|15|A|G|39
2MIY|15|A|G|40
2MIY|15|A|A|41
2MIY|15|A|U|42
2MIY|15|A|A|43
2MIY|15|A|A|44
2MIY|15|A|C|45
2MIY|15|A|C|46
Current chains
- Chain A
- RNA_(59-MER)
Nearby chains
No other chains within 10ÅColoring options: