HL_2N3Q_030

3D structure

PDB id

2N3Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMR structure of the II-III-VI three-way junction from the VS ribozyme

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

2N3Q|15|A|U|39

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2N3Q_030 not in the Motif Atlas

Geometric match to HL_3IGI_008

Geometric discrepancy: 0.2611

The information below is about HL_3IGI_008

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

2N3Q|15|A|C|37
2N3Q|15|A|U|38
2N3Q|15|A|U|39
2N3Q|15|A|C|40
2N3Q|15|A|G|41
2N3Q|15|A|G|42

Current chains

Chain A

RNA (62-MER)

Nearby chains