HL_2QA4_050

3D structure

PDB id

2QA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGGGUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2QA4_050 not in the Motif Atlas

Geometric match to HL_4ANG_001

Geometric discrepancy: 0.3736

The information below is about HL_4ANG_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

2QA4|1|0|G|1947
2QA4|1|0|G|1948
2QA4|1|0|G|1949
2QA4|1|0|G|1950
2QA4|1|0|G|1951
2QA4|1|0|U|1964
2QA4|1|0|C|1965

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains