HL_2R8S_002

3D structure

PDB id

2R8S (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain

Experimental method

X-RAY DIFFRACTION

Resolution

1.95 Å

Loop

Sequence

CUUGCAAAG

Length

9 nucleotides

Bulged bases

2R8S|1|R|U|168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80008.1

Basepair signature

cWW-F-F-F-cSH-F

Number of instances in this motif group

1

Unit IDs

2R8S|1|R|C|166
2R8S|1|R|U|167
2R8S|1|R|U|168
2R8S|1|R|G|169
2R8S|1|R|C|170
2R8S|1|R|A|171
2R8S|1|R|A|172
2R8S|1|R|A|173
2R8S|1|R|G|174

Current chains

Chain R

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains

Chain H

Fab heavy chain

Chain L

Fab light chain