2R8S Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2R8S_001 | 1/R/149:154 | GNRA HL_37824.7 | ||
| HL_2R8S_002 | 1/R/166:174 | No text annotation HL_80008.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2R8S_003 | tRNA D-loop |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2R8S_001 | 1/R/110:112, 1/R/208:211 | Isolated non-canonical cWW pair IL_87907.2 | ||
| IL_2R8S_002 | 1/R/112:116, 1/R/205:208 | UAA/GAN variation IL_77691.5 | ||
| IL_2R8S_003 | 1/R/121:127, 1/R/195:200 | Kink-turn related IL_68405.1 | ||
| IL_2R8S_004 | 1/R/129:131, 1/R/192:193 | Single bulged U IL_89505.4 | ||
| IL_2R8S_005 | 1/R/134:136, 1/R/182:189 | cWH basepair with bulged bases IL_74957.1 | ||
| IL_2R8S_006 | 1/R/216:220, 1/R/253:257 | UAA/GAN variation IL_23774.1 | ||
| IL_2R8S_007 | 1/R/223:227, 1/R/247:250 | Receptor of 11-nt loop-receptor motif IL_53448.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_2R8S_001 | 1/R/138:141, 1/R/162:165, 1/R/175:180 | No text annotation J3_98798.1 |
Problematic loops
No problematic loops
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