HL_2RD2_001

3D structure

PDB id

2RD2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CAAGCGGUAAG

Length

11 nucleotides

Bulged bases

2RD2|1|B|C|916, 2RD2|1|B|G|918

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2RD2_001 not in the Motif Atlas

Geometric match to HL_4JXZ_001

Geometric discrepancy: 0.1025

The information below is about HL_4JXZ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55043.2

Basepair signature

cWW-tSH-cWS-F

Number of instances in this motif group

5

Unit IDs

2RD2|1|B|C|912
2RD2|1|B|A|913
2RD2|1|B|A|914
2RD2|1|B|G|915
2RD2|1|B|C|916
2RD2|1|B|G|918
2RD2|1|B|G|919
2RD2|1|B|U|920
2RD2|1|B|A|921
2RD2|1|B|A|922
2RD2|1|B|G|923

Current chains

Chain B

Glutamine tRNA

Nearby chains

Chain A

Glutaminyl-tRNA synthetase