HL_2TPK_001
3D structure
- PDB id
- 2TPK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS
- Experimental method
- SOLUTION NMR
- Resolution
Loop
- Sequence
- CAGCUAUGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2TPK_001 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.2106
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
2TPK|1|A|C|7
2TPK|1|A|A|8
2TPK|1|A|G|9
2TPK|1|A|C|10
2TPK|1|A|U|11
2TPK|1|A|A|12
2TPK|1|A|U|13
2TPK|1|A|G|14
2TPK|1|A|A|15
2TPK|1|A|G|16
Current chains
- Chain A
- RNA (MRNA PSEUDOKNOT)
Nearby chains
No other chains within 10ÅColoring options: