HL_2UXB_014
3D structure
- PDB id
- 2UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUCAAC
- Length
- 7 nucleotides
- Bulged bases
- 2UXB|1|A|U|619
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2UXB_014 not in the Motif Atlas
- Homologous match to HL_4LFB_014
- Geometric discrepancy: 0.099
- The information below is about HL_4LFB_014
- Detailed Annotation
- GNRA-like with tWH
- Broad Annotation
- GNRA
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
2UXB|1|A|G|617
2UXB|1|A|C|618
2UXB|1|A|U|619
2UXB|1|A|C|620
2UXB|1|A|A|621
2UXB|1|A|A|622
2UXB|1|A|C|623
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- RIBOSOMAL PROTEIN S4
- Chain G
- RIBOSOMAL PROTEIN S7
- Chain P
- RIBOSOMAL PROTEIN S16
Coloring options: