HL_2UXB_028
3D structure
- PDB id
- 2UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2UXB_028 not in the Motif Atlas
- Homologous match to HL_4LFB_028
- Geometric discrepancy: 0.1039
- The information below is about HL_4LFB_028
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
2UXB|1|A|G|1265
2UXB|1|A|G|1266
2UXB|1|A|C|1267
2UXB|1|A|A|1268
2UXB|1|A|A|1269
2UXB|1|A|C|1270
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain G
- RIBOSOMAL PROTEIN S7
- Chain M
- RIBOSOMAL PROTEIN S13
- Chain S
- RIBOSOMAL PROTEIN S19
- Chain U
- RIBOSOMAL PROTEIN THX
Coloring options: