HL_2WWB_002
3D structure
- PDB id
- 2WWB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.48 Å
Loop
- Sequence
- UGCAGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2WWB_002 not in the Motif Atlas
- Geometric match to HL_5TBW_066
- Geometric discrepancy: 0.3105
- The information below is about HL_5TBW_066
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_65794.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
2WWB|1|D|U|74
2WWB|1|D|G|75
2WWB|1|D|C|76
2WWB|1|D|A|77
2WWB|1|D|G|78
2WWB|1|D|A|79
Current chains
- Chain D
- 5.8S RRNA
Nearby chains
- Chain A
- PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1
- Chain B
- PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA
- Chain L
- 60S RIBOSOMAL PROTEIN L26-A
- Chain N
- 60S RIBOSOMAL PROTEIN L35
- Chain O
- 60S RIBOSOMAL PROTEIN L39
Coloring options: