HL_2XLK_002

3D structure

PDB id

2XLK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Csy4-crRNA complex, orthorhombic form

Experimental method

X-RAY DIFFRACTION

Resolution

1.8 Å

Loop

Sequence

CGUAUAG

Length

7 nucleotides

Bulged bases

2XLK|1|D|U|14

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2XLK_002 not in the Motif Atlas

Geometric match to HL_5O7H_001

Geometric discrepancy: 0.155

The information below is about HL_5O7H_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

302

Unit IDs

2XLK|1|D|C|10
2XLK|1|D|G|11
2XLK|1|D|U|12
2XLK|1|D|A|13
2XLK|1|D|U|14
2XLK|1|D|A|15
2XLK|1|D|G|16

Current chains

Chain D

5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3'

Nearby chains

Chain B

CSY4 ENDORIBONUCLEASE