HL_2XZM_032

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

UUUGGAAUUGUG

Length

12 nucleotides

Bulged bases

2XZM|1|A|U|1529, 2XZM|1|A|U|1530, 2XZM|1|A|G|1531

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67367.1

Basepair signature

cWW-R-R-R-R-R-R

Number of instances in this motif group

2

Unit IDs

2XZM|1|A|U|1522
2XZM|1|A|U|1523
2XZM|1|A|U|1524
2XZM|1|A|G|1525
2XZM|1|A|G|1526
2XZM|1|A|A|1527
2XZM|1|A|A|1528
2XZM|1|A|U|1529
2XZM|1|A|U|1530
2XZM|1|A|G|1531
2XZM|1|A|U|1532
2XZM|1|A|G|1533

Current chains

Chain A

18S RRNA

Nearby chains

Chain M

RPS18E

Chain N

RPS29E

Chain S

RPS15E

Chain T

RPS19E